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Acute Cystitis

Acute cystitis, commonly known as a bladder infection or urinary tract infection (UTI), is an acute inflammation of the bladder, most frequently caused by bacterial infection. It is a widespread condition affecting millions globally each year, particularly women, due to anatomical factors that facilitate bacterial entry into the urinary tract. While often considered a minor ailment, acute cystitis can cause significant discomfort and, if left untreated, may lead to more serious kidney infections (pyelonephritis).[1]

The primary biological basis of acute cystitis involves the invasion and proliferation of microorganisms, predominantly bacteria, within the bladder.Escherichia coli is the most common causative agent, responsible for approximately 80-90% of community-acquired cases. Other bacteria such as Klebsiella pneumoniae, Proteus mirabilis, and Staphylococcus saprophyticuscan also cause cystitis. These bacteria typically ascend from the periurethral area into the urethra and then into the bladder. Host defenses, including urinary flow, bladder epithelial cell exfoliation, and innate immune responses, usually prevent infection. However, when these defenses are overwhelmed or compromised, bacteria can adhere to the bladder lining, multiply, and trigger an inflammatory response. Genetic factors, such as variations in genes influencing immune response, host receptor expression, or urinary tract anatomy, are hypothesized to play a role in an individual’s susceptibility or resistance to recurrent infections. Studies often investigate single-nucleotide polymorphisms (SNPs) which are variations at a single position in a DNA sequence[2], [3]. [4]These genetic variations can be assessed in genome-wide association studies (GWAS) to identify loci that contribute to disease risk[1], [3]. [2] Such studies examine the minor allele frequency (MAF) of SNPs and calculate odds ratios (OR) to determine the association strength between a genetic variant and the trait [3]. [4]

Clinically, acute cystitis presents with a characteristic set of symptoms including dysuria (painful urination), frequent urination, urgency, and suprapubic pain. Hematuria (blood in urine) may also occur. Diagnosis is typically made based on symptoms and confirmed by urinalysis and urine culture. Treatment usually involves a short course of antibiotics, which effectively eradicates the bacterial infection and alleviates symptoms. However, recurrent acute cystitis is common, particularly in women, impacting quality of life and potentially leading to antibiotic resistance with repeated treatments. Understanding the genetic underpinnings could lead to personalized prevention strategies or novel therapeutic targets.

The social importance of acute cystitis is significant due to its high prevalence and impact on public health. It is a leading cause of outpatient visits and antibiotic prescriptions, contributing to healthcare costs and the global challenge of antimicrobial resistance. The discomfort and disruption to daily life caused by symptoms can affect productivity, work attendance, and overall well-being. For individuals with recurrent episodes, the condition can cause considerable distress and anxiety. Research into genetic susceptibility to acute cystitis, including identifying specific SNPs and their associated odds ratios[3]could lead to better risk stratification, targeted interventions, and ultimately reduce the burden of this common infection on individuals and healthcare systems.

The studies faced challenges in maintaining homogeneous populations across discovery and replication phases, which could introduce bias and affect the interpretation of findings. For instance, the BWH CSS population, part of one replication cohort, was substantially sicker than the TRIBE population, exhibiting longer cardiopulmonary bypass times and higher incidences of chronic kidney disease (CKD)[3]Similarly, differences were noted between the PEGASUS discovery cohort and the CATHGEN replication cohort, including varying cardiac surgical procedures (isolated CABG versus CABG with concomitant valve surgery), and a higher prevalence of comorbidities such as congestive heart failure, hypertension, and hypercholesterolemia in the replication cohort[2] These variations in patient characteristics and clinical settings, despite extensive efforts to identify similar populations, can lead to differing results and necessitate careful consideration when interpreting the generalizability of identified genetic associations.

Furthermore, the analyses were largely restricted to subjects of self-reported European ancestry While strict definitions were used to enhance specificity for “true” AKI, such as a minimum 0.3 mg/dl or 50% increase in serum creatinine for at least two consecutive days, these criteria may not capture all forms or severities of AKI [3] The unavailability of urine output data in some study populations further constrained the ability to sensitively detect AKI, as urine output alongside serum creatinine offers a more comprehensive diagnostic approach [3]

The primary study outcome in some analyses, the percentage change of the highest postoperative serum creatinine from baseline (%ΔCr), though a validated marker, could be refined for a more powerful study [2]A more powerful study might incorporate additional variables into the AKI phenotype and clinical risk score, such as preoperative albuminuria, acute decline in renal function prior to and following surgery, and perioperative use of renin-angiotensin system inhibitors[2] The absence of such detailed data for all patients represents a missed opportunity to enhance the precision and comprehensiveness of the AKI phenotype, potentially limiting the power to detect genetic variants with smaller effect sizes.

Statistical Power and Remaining Knowledge Gaps

Section titled “Statistical Power and Remaining Knowledge Gaps”

The discovery panels in these studies had 80% power to identify variants with odds ratios greater than 1.6, assuming a minor allele frequency not less than 30% [3] However, identifying all genetic variants associated with a complex and heterogeneous disorder like AKI often requires combining data from multiple large cohorts [3] The current sample sizes, while substantial, may still be insufficient to detect variants with smaller effect sizes or those with lower minor allele frequencies, potentially leading to an underestimation of the full genetic landscape of AKI [2]

Furthermore, the research highlights remaining knowledge gaps, including the challenge of replicating findings from prior candidate gene studies, particularly those based on mouse models, due to minimal overlap between murine and human transcriptomes [3] Despite identifying and finding support for some loci, the broad genetic architecture of AKI remains complex, analogous to other heterogeneous disorders where numerous loci were only definitively identified after combining extensive datasets [3]This underscores the need for continued, collaborative research across diverse patient populations to fully elucidate the genetic underpinnings of acute kidney injury.

The genetic variants rs576277880 and rs151283019 are associated with the FIGN and ASTN2genes, respectively, and their functions may offer insights into the predisposition and progression of acute cystitis.FIGN (Fidgetin) encodes a protein that plays a crucial role as a microtubule-severing enzyme, regulating the dynamic assembly and disassembly of microtubules within cells. [5] These cytoskeletal components are fundamental for various cellular processes, including cell shape maintenance, motility, and intracellular transport, which are all critical for immune cell function. The rs576277880 variant, located within or near the FIGN gene, may influence its expression levels or alter the enzymatic activity of the Fidgetin protein, potentially leading to dysregulated microtubule dynamics and affecting the efficiency of the immune response in the urinary tract. [6]

Similarly, the ASTN2 (Astrotactin 2) gene is associated with the rs151283019 variant. ASTN2 encodes a protein primarily recognized for its involvement in cell adhesion and migration, particularly in neuronal development, but its function extends to various other tissues where it contributes to cell-cell interactions and tissue integrity. [7]In the context of acute cystitis, maintaining the integrity of the bladder’s epithelial lining is essential to prevent bacterial adherence and invasion. A change inASTN2 function due to the rs151283019 variant could potentially compromise these cell adhesion properties, making the bladder more vulnerable to infection. Such alterations could impact the bladder’s natural barrier function or the coordinated migration of immune cells necessary to combat pathogens, thereby influencing susceptibility to or severity of acute cystitis.[8]

Collectively, these variants suggest a genetic basis for individual differences in the cellular and immunological responses that underpin acute cystitis. TheFIGN gene’s role in microtubule dynamics could affect the ability of immune cells to effectively respond to bladder infections, while ASTN2 might influence the protective barrier function of the bladder epithelium and overall cellular interactions. Understanding these genetic predispositions may provide valuable insights into personalized risk assessment and potential therapeutic targets for inflammatory conditions of the urinary tract. [9] Further investigation into the precise molecular mechanisms by which rs576277880 and rs151283019 impact FIGN and ASTN2function is crucial for a comprehensive understanding of their contributions to disease pathogenesis.[6]

RS IDGeneRelated Traits
rs576277880 RNU6-627P - FIGNacute cystitis
rs151283019 ASTN2X-16935 measurement
methyl glucopyranoside (alpha + beta) measurement
acute cystitis

Frequently Asked Questions About Acute Cystitis

Section titled “Frequently Asked Questions About Acute Cystitis”

These questions address the most important and specific aspects of acute cystitis based on current genetic research.


1. Why do I get UTIs so often, but my friend never does?

Section titled “1. Why do I get UTIs so often, but my friend never does?”

Your frequent UTIs compared to your friend could be influenced by genetic factors. Variations in your genes might affect your immune system’s ability to fight off bacteria, how bacteria adhere to your bladder lining, or even subtle differences in your urinary tract anatomy, making you more susceptible to recurrent infections.

2. Does my family history mean I’ll get more UTIs?

Section titled “2. Does my family history mean I’ll get more UTIs?”

Yes, a family history of frequent UTIs can suggest a genetic predisposition. If close relatives experience recurrent infections, you might have inherited similar genetic variations that influence your immune response or the structure of your urinary tract, increasing your own susceptibility.

3. Is there a test to see if I’m at high risk for UTIs?

Section titled “3. Is there a test to see if I’m at high risk for UTIs?”

Currently, there isn’t a widely available genetic test specifically for acute cystitis risk in everyday practice. However, research using methods like genome-wide association studies (GWAS) is identifying genetic variations (SNPs) that contribute to risk, which could lead to future personalized risk assessments.

4. Why do some people clear UTIs easily, but mine always get worse?

Section titled “4. Why do some people clear UTIs easily, but mine always get worse?”

The difference in how easily you clear UTIs can relate to your body’s innate defenses, which are partly under genetic control. Genetic variations can influence the strength of your immune response or how effectively your bladder cells shed bacteria, impacting how well you fight off an infection.

5. My sister and I both get UTIs, but hers are worse. Why?

Section titled “5. My sister and I both get UTIs, but hers are worse. Why?”

Even within the same family, individual genetic variations can lead to different experiences. Subtle differences in your and your sister’s genes might affect your respective immune responses or the specific ways your bodies react to bacterial invasion, leading to varying symptom severity.

6. Are women more prone to UTIs due to genetics?

Section titled “6. Are women more prone to UTIs due to genetics?”

Women are primarily more prone to UTIs due to anatomical factors, like a shorter urethra, which facilitates bacterial entry. However, genetic factors influencing immune response and host receptor expression are also hypothesized to contribute to individual susceptibility and recurrence, potentially interacting with these anatomical differences.

7. Can I ever truly “overcome” my tendency for UTIs?

Section titled “7. Can I ever truly “overcome” my tendency for UTIs?”

While some susceptibility might be linked to your genetics, you can definitely manage and reduce your risk. Understanding your genetic predispositions could lead to personalized prevention strategies, but maintaining good hygiene and addressing any modifiable risk factors are crucial steps you can take.

8. Does my ethnic background affect my UTI risk?

Section titled “8. Does my ethnic background affect my UTI risk?”

Genetic studies often focus on specific ancestral groups, and research notes that findings in one group may not be universally applicable to others. This suggests that genetic risk factors for UTIs could potentially differ or have varying effects across diverse populations, making your background a relevant consideration for future research.

9. Why do antibiotics work for others but seem less effective for my recurrent UTIs?

Section titled “9. Why do antibiotics work for others but seem less effective for my recurrent UTIs?”

If you experience recurrent UTIs, it might be due to your underlying genetic susceptibility making you prone to reinfection or less effective at clearing bacteria initially. While antibiotic resistance is a separate issue, your body’s genetic ability to mount an immune response could influence overall treatment success and recurrence.

10. Could understanding my genes help prevent future UTIs?

Section titled “10. Could understanding my genes help prevent future UTIs?”

Yes, research into the genetic underpinnings of acute cystitis is aimed at identifying specific genetic variations that confer susceptibility. This knowledge could eventually lead to better risk stratification, personalized prevention strategies, and even novel therapeutic targets tailored to your genetic profile.


This FAQ was automatically generated based on current genetic research and may be updated as new information becomes available.

Disclaimer: This information is for educational purposes only and should not be used as a substitute for professional medical advice. Always consult with a healthcare provider for personalized medical guidance.

[1] Vijayakrishnan, J, et al. “Genome-wide association study identifies susceptibility loci for B-cell childhood acute lymphoblastic leukemia.”Nat Commun, 2019. PMID: 29632299.

[2] Stafford-Smith, M, et al. “Genome-wide association study of acute kidney injury after coronary bypass graft surgery identifies susceptibility loci.”Kidney Int, 2016. PMID: 26083657.

[3] Zhao, B, et al. “A Genome-Wide Association Study to Identify Single-Nucleotide Polymorphisms for Acute Kidney Injury.”Am J Respir Crit Care Med, 2016. PMID: 27576016.

[4] Lee, E, et al. “Genome-wide enriched pathway analysis of acute post-radiotherapy pain in breast cancer patients: a prospective cohort study.”Hum Genomics, 2019. PMID: 31196165.

[5] Alberts, Bruce et al. Molecular Biology of the Cell. Garland Science, 2014.

[6] Strachan, Tom and Andrew P. Read. Human Molecular Genetics. Garland Science, 2019.

[7] Lodish, Harvey et al. Molecular Cell Biology. W. H. Freeman, 2016.

[8] Janeway, Charles A. et al. Immunobiology: The Immune System in Health and Disease. Garland Science, 2012.

[9] Manolio, Teri A. and Francis S. Collins. “Genome-wide association studies and assessment of the risk of disease.” New England Journal of Medicine, 2009.